Package: samc 4.0.0
Andrew Marx
samc: Spatial Absorbing Markov Chains
Implements functions for working with absorbing Markov chains. The implementation is based on the framework described in "Toward a unified framework for connectivity that disentangles movement and mortality in space and time" by Fletcher et al. (2019) <doi:10.1111/ele.13333>, which applies them to spatial ecology. This framework incorporates both resistance and absorption with spatial absorbing Markov chains (SAMC) to provide several short-term and long-term predictions for metrics related to connectivity in landscapes. Despite the ecological context of the framework, this package can be used in any application of absorbing Markov chains.
Authors:
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|samc.html✨
samc/json (API)
NEWS
# Install 'samc' in R: |
install.packages('samc', repos = c('https://andrewmarx.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/andrewmarx/samc/issues
absorbing-markov-chainsconnectivitylandscape-ecologylandscape-metricsmarkov-chain
Last updated 6 days agofrom:409f3871d3. Checks:ERROR: 1 WARNING: 8. Indexed: yes.
Target | Result | Date |
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Doc / Vignettes | FAIL | Oct 31 2024 |
R-4.5-win-x86_64 | WARNING | Oct 31 2024 |
R-4.5-linux-x86_64 | WARNING | Oct 31 2024 |
R-4.4-win-x86_64 | WARNING | Oct 31 2024 |
R-4.4-mac-x86_64 | WARNING | Oct 31 2024 |
R-4.4-mac-aarch64 | WARNING | Oct 31 2024 |
R-4.3-win-x86_64 | WARNING | Oct 31 2024 |
R-4.3-mac-x86_64 | WARNING | Oct 31 2024 |
R-4.3-mac-aarch64 | WARNING | Oct 31 2024 |
Exports:absorptioncheckcond_passagedispersaldistributionlocatemapmortalitypairwiserasterizesamcsurvivalvisitationvisitation_net
Dependencies:bootcircularlatticeMatrixmvtnormrasterRcppRcppEigenRcppThreadspterra
Overview
Rendered fromoverview.Rmd
usingknitr::rmarkdown
on Oct 31 2024.Last update: 2024-10-31
Started: 2019-08-12
Readme and manuals
Help Manual
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